Design, implement, and operate robust, scalable genomic data processing pipelines using Nextflow on AWS; Manage pipeline results using big data technologies (e.g. distributed databases); Manage pipeline-related assets to ensure that they are findable, accessible, interoperable and reusable; Apply best practices for version control, testing, and documentation; Ensure data quality and integrity by implementing and maintaining rigorous quality control and data validation procedures; Collaborate closely with platform scientists, data scientists, and data engineers to solve complex data processing and analysis challenges
Requirements:
MSc or PhD or equivalent in bioinformatics, computational biology, computer science, or similar discipline; 3-plus years of post-graduate or industry experience developing high-throughput bioinformatic data processing pipelines; Experience in NGS mapping, variant calling and variant analysis preferred; Experience in bioinformatics workflow frameworks (NextFlow), version control systems (Git), Cloud (AWS preferred), and containers (Docker preferred); High level of proficiency in Python or equivalent and Linux
Text:
Bioinformatics Engineer Design, implement, and operate robust, scalable genomic data processing pipelines using Nextflow on AWS; Manage pipeline results using big data technologies (e.g. distributed databases); Manage pipeline-related assets to ensure that they are findable, accessible, interoperable and reusable; Apply best practices for version control, testing, and documentation; Ensure data quality and integrity by implementing and maintaining rigorous quality control and data validation procedures; Collaborate closely with platform scientists, data scientists, and data engineers to solve complex data processing and analysis challenges MSc or PhD or equivalent in bioinformatics, computational biology, computer science, or similar discipline; 3-plus years of post-graduate or industry experience developing high-throughput bioinformatic data processing pipelines; Experience in NGS mapping, variant calling and variant analysis preferred; Experience in bioinformatics workflow frameworks (NextFlow), version control systems (Git), Cloud (AWS preferred), and containers (Docker preferred); High level of proficiency in Python or equivalent and Linux
Please click here, if the job didn't load correctly.
Please wait. You are being redirected to the job in 3 seconds.
